BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F03LP1|AL426237
(461 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1549 644 0.0
>3x_Contig1549
Length = 13677
Score = 644 bits (319), Expect = 0.0
Identities = 420/458 (91%), Gaps = 4/458 (0%)
Strand = Plus / Minus
Query: 1 atcgtagcccttcttgattcagaatcataataatgatacttttgaaagctcatctctgta 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 10838 atcgtagcccttcttgattcagaatca-aataatgatacttttgaaagctcatctctgta 10780
Query: 61 taagttgaattgtaatttttttttcgaaatatttcattctcaaataacccactgaaacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10779 taagttgaattgtaatttttttttcgaaatatttcattctcaaataacccactgaaacta 10720
Query: 121 ccgcaccatgaaagaagaaattcacatacaaaagcaaaaatctgcgatgagatgaagatg 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 10719 ccgcaccatgaaagaagaaattcacatacaaaag-aaaaatctgcgatgagatga-gatg 10662
Query: 181 agctgaaaagggaatagaagtgagaaaaagaaataaagaaggaaagagcaaaaagatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10661 agctgaaaagggaatagaagtgagaaaaagaaataaagaaggaaagagcaaaaagatcaa 10602
Query: 241 atccgtgaaaratgattwatataaatttcagatcmcgtggttacggggaaccccmccgcw 300
|||||||||| |||||| |||| ||||||||||| |||||||||| |||||||| | ||
Sbjct: 10601 atccgtgaaagatgatttatatgaatttcagatcacgtggttacgaggaaccccacagct 10542
Query: 301 acctwttmctgtmmmmcgggtactgarattttcggatattgggangttgggtctttgttg 360
|| | | ||| ||| |||||| ||||||||||||||||| || || |||||||||
Sbjct: 10541 acattatcatgtcacacggatactgagattttcggatattgggaagtaggatctttgttg 10482
Query: 361 tangttttccatcgntgtaaaacaatttgaacattgtaattaatgaatgatgatttagtg 420
|| ||||||||||| ||||||| ||| ||| || || ||||||||||||||||||||||
Sbjct: 10481 taagttttccatcgatgtaaaa-aatatgacaatagtgattaatgaatgatgatttagtg 10423
Query: 421 aataatttaatgaatgactractcggagaaataaagaa 458
||| | ||||||||||| | | ||||||||||||||||
Sbjct: 10422 aatgaattaatgaatgaatgaatcggagaaataaagaa 10385
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5749
Number of Sequences: 1807
Number of extensions: 5749
Number of successful extensions: 162
Number of sequences better than 1.0e-20: 1
length of query: 461
length of database: 10,358,551
effective HSP length: 15
effective length of query: 446
effective length of database: 10,331,446
effective search space: 4607824916
effective search space used: 4607824916
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)